PKG

Protein list:

ITGA4 COL3A1 COL4A6 CBL LAMB3 ARF6 RHOA JAK2 PRKAR1B COL1A1 COL5A3 RASSF5 CRK COL1A2 VTN PRKACB COL11A1 COL4A2 COL4A4 COL2A1 COL6A1 COL6A6 COL5A2 LAMA1 RAC1 SRC THBS3 COL6A2 TNR RELN TNC LAMB2 COL4A1 TNXB LAMC1 JAML BCAR1 NCKAP1L CHAD LAMC2 COMP LAMC3 COL11A2 LAMA3 RAP1A COL6A3 RAP1B TNN THBS4 LAMA2 LAMB4 COL5A1 PTK2B CRKL PTPN2 LAMA5 LAMB1 LAMA4 IBSP PRKACA HNRNPL HSPE1 CD81 ILF2 CAD HSPA1B ACTC1 HIST2H2BF EIF4G1 HIST1H4K ACTN4 HSPD1 HIST1H2BI HIST1H2BG PFKP CPSF7 ITGB7 AP2B1 HSPA8 HNRNPH1 AKR7A2 HIST1H4L HIST2H3D HNRNPR HIST1H2BL HIST1H4J HNRNPA2B1 CCT4 HIST2H4A NTPCR XRCC6 CCT6A DDX1 ESYT1 PRSS2 H3F3AP6 EIF4E BTNL8 DDX5 HIST1H4A HBG1 CPA2 CLTA EEF1A1 HIST1H3I HNRNPD HIST1H2BN FCGR2A DNM2 FUBP3 IST1 HIST1H4C HIST1H2AC HIST1H4D EED EIF2S1 DAZAP1 CSE1L ANKRD17 SPP1 HIST1H3B EIF3K CHMP4B HIST1H2BF DNAJC7 CSNK2B BUB3 HIST1H3H ACP1 FN1 DDX17 VCAM1 HIST1H4B HNRNPK CFL1 GCN1L1 DDX3X HBA1 HNRNPC DYNC1H1 EEF1D HBE1 INPPL1 TAFA4 FLNA HNRNPA0 HIST1H3C HBZ CDK1 CCAR2 HBG2 CHMP2A HIST1H3F HIST1H2AE HSD17B10 IGF2BP2 HIST3H2A FCGR2C ACTB CLIC1 ST8SIA4 HIST2H3A FUS CAPN1 HRAS CLTC CX3CR1 RPL26 MIF TUBA1C RPS6 LRPPRC PHB PPIL1 RPS16 NQO1 SYK PCBP1 UBB PTPN23 LGALS8 RPL18 RPS2 PCMT1 KRT9 VARS RBM4 RPL14 PRDX6 RPL17 SRP9 RSL1D1 NDUFA2 NCL SF1 TOMM34 RPL9 RPL23A PRKDC RPS11 VIM RAB10 UBC CX3CL1 MBNL1 PFN1 KRT19 VCP RPL11 LPXN TLN1 TGFB1I1 MCM7 SEC24C PPIH RPL38 RPL35 LDHA LRRC59 RPS19 RPLP0 PARP1 KHSRP XRCC5 RPS14 PSMA7 NSUN2 NUP214 HIST1H3E PRDX2 RPS21 PSMB1 PPIA PTK2 PIN1 HIST4H4 NUDT21 TUBB4B SNRPD2 SNRPD1 KRT16 SNX3 SNRNP200 RPS5 SLC25A5 HIST1H2AG

Seperate proteins by space | Example

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Protein:

Eg: PBRM1 | ARID1A | BRCA1

Function:

Eg: Homologous recombination

Path:

Eg: SMC5 > DMC1 | PBRM1 > BRCA2

Relationship:

Full list of relationships

Graph tools:

Note this may take some time with > 30 proteins

Filter Graph:

PKG Score Threshold: 0.8

Layout:
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Filter Table:

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Search:

Source	Target	Relationship Type	Directed	Sign	DB Score	PKG Score	Database	References
ACP1	SRC	◼ POST_TRANSLATIONAL_REGULATION	✅	+	3.0	0.9	Omnipath	19088431
ACTB	DYNC1H1	◼ PHYSICAL_INTERACTION			812.0	0.81	STRING	36370105
ACTB	HIST1H4J	◼ PHYSICAL_INTERACTION			821.0	0.82	STRING	36370105
ACTB	HIST1H4B	◼ PHYSICAL_INTERACTION			821.0	0.82	STRING	36370105
ACTB	HIST1H4C	◼ PHYSICAL_INTERACTION			821.0	0.82	STRING	36370105
ACTB	HIST2H4A	◼ PHYSICAL_INTERACTION			821.0	0.82	STRING	36370105
ACTB	HIST1H4D	◼ PHYSICAL_INTERACTION			821.0	0.82	STRING	36370105
ACTB	HIST1H4K	◼ PHYSICAL_INTERACTION			821.0	0.82	STRING	36370105
ACTB	HIST1H4L	◼ PHYSICAL_INTERACTION			821.0	0.82	STRING	36370105
ACTB	HIST4H4	◼ PHYSICAL_INTERACTION			821.0	0.82	STRING	36370105

Showing 1 to 10 of 893 entries