PKG

Protein list:

RBM10 CASP3 TNF BCL2 AR MBIP TCERG1 IQGAP1 RPRD2 EXOC1 RPS26 RRP15 TCF20 SETD2 NSL1 ACTR2 SP3 NUPL1 EXOC5 EIF3E SNRPB SF3A3 EXOC4 RNPS1 RBM45 ZNF143 CBX8 BRMS1L MSL1 SF3B5 EMSY LEO1 KIAA1033 AP3B1 PSPC1 NUDT21 KHSRP GATAD2A TAF10 ARPC2 MED10 PRPF40A TPR SNRPA1 TAF9 TADA3 POLR2J AKAP8L RBMX RNF2 SNRPF THOC3 TIAL1 CDK2AP1 CCDC12 SCAF8 MYH11 CDC5L HMG20A VPS35 SAP30BP POLR2G NUP98 BUD13 EHMT1 KANSL1 ZZZ3 RBBP6 RBM8A ING5 ZNFX1 SMARCE1 ZNF318 NUP37 YEATS2 COPB1 HNRNPAB ARPC4 RBBP4 SYF2 CSTF1 CHAF1A MAD1L1 THOC6 FUS RBM6 CAPN2 ARFGEF1 PQBP1 NFRKB GATAD2B AKAP8 KANSL2 COPB2 RING1 SRSF11 RBM39 MPHOSPH10 DYNC1H1 CCDC101 COPG1 ELAVL1 THOC7 NUP43 MED8 SF1 SNRNP48 SF3B4 BRD8 RBMXL1 CSTF2 SNRPD2 SPEN HNRNPH3 RAE1 NUP62 PPHLN1 BANP TAF4 ZMAT5 PAF1 NUP153 RBBP7 NCOA5 USF1 MED4 SF3B14 PRPF4 NHP2L1 POLR2C GPATCH8 ING3 FIP1L1 BRD4 YLPM1 SNRPC CWC15 MBD3 DAZAP1 SREK1 BCL2L2 SRSF10 CBX1 WDR33 ZNF326 THRAP3 ZC3H11A FLII CHAMP1 SNW1 WIZ COPA ADNP RBM17 WBP11 NUPL2 SNRPG HCFC1 TRA2B HNRNPH2 PHF5A MEAF6 SRSF4 HNRNPDL TOX4 ERH NUP35 HNRNPD BUB3 SUGP1 CPSF7 PRPF6 ZNF275 PLRG1 PRCC TBC1D22B CTNNBL1 ACTL6A AGO3 ZNF526 SP7 PRPF19 NCBP2 CEP70 PUF60 HNRNPK GAN AGO4 HSPA8 CPSF6 THAP1 PRPF3 HNRNPA1 ZNF473 CBLL1 RBMXL2 TP53BP1 PCBP1 HNRNPA0 FZR1 ILF3 GEMIN6 DDX17 CUL3 SF3A1 ZNF408 ZNF207 SRSF8 HNRNPU STRAP RBM7 SRRT SF3B6 SMARCC1 SART3 SMN1 RBM25 SMARCD1 SNRPB2 SFSWAP SMARCA4 SART1 SF3A2 SF3B3 SF3B1 SMARCA2 SEC31B YBX1 SNRNP40 TRIR RBM42 SMNDC1 SNRPD1 SMARCB1 SNRPE RUVBL1 SRRM1 SNRNP200

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Protein:

Eg: PBRM1 | ARID1A | BRCA1

Function:

Eg: Homologous recombination

Path:

Eg: SMC5 > DMC1 | PBRM1 > BRCA2

Relationship:

Full list of relationships

Graph tools:

Note this may take some time with > 30 proteins

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PKG Score Threshold: 0.8

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Source	Target	Relationship Type	Sign	DB Score	PKG Score	Database	References
ACTL6A	SMARCC1	◼ PHYSICAL_INTERACTION		918.0	0.91	STRING	36370105
ACTL6A	RUVBL1	◼ PHYSICAL_INTERACTION		947.0	0.94	STRING	36370105
ACTL6A	SMARCA2	◼ PHYSICAL_INTERACTION		966.0	0.96	STRING	36370105
ACTL6A	SMARCB1	◼ PHYSICAL_INTERACTION		968.0	0.96	STRING	36370105
ACTL6A	SMARCD1	◼ PHYSICAL_INTERACTION		970.0	0.97	STRING	36370105
ACTL6A	SMARCE1	◼ PHYSICAL_INTERACTION		974.0	0.97	STRING	36370105
ACTL6A	SMARCA4	◼ PHYSICAL_INTERACTION		994.0	0.99	STRING	36370105
ACTR2	ARPC2	◼ CORRELATES	+	0.91	0.91	CCLE	31978347
ACTR2	ARPC4	◼ CORRELATES	+	0.91	0.91	CCLE	31978347
ACTR2	ARPC2	◼ PHYSICAL_INTERACTION		17.0	1.0	ACSN	10467124 10511705 10783245 11395419 11520460 12177428 12194823 14707117 15001467 15541654 16293614 16606694 17306570 19741094 21178402 23212475 8625410

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