PKG

Protein list:

GABARAPL2 GABARAPL1 HNRNPA1 LLGL1 HYOU1 PCMT1 OSBPL7 ANXA2 AAK1 PSPC1 PRDX6 ERBB3 RO60 KARS1 SGTA MCM7 MAP1LC3A ATP5F1A RABGAP1 SMARCC1 RETREG3 ATG4D TBC1D15 CCPG1 HNRNPA0 ECHS1 ARFGAP1 BSDC1 MAP1LC3C MATR3 EPPK1 RASSF5 ANK2 PRKCSH RPL22 AMBRA1 STK3 RPL36 DNAAF4 ZBTB2 TEX264 FNBP1 MAP1LC3B SAFB2 GSPT1 TNIP1 FUNDC1 EZR CALCOCO1 TP53INP1 TBC1D5 CCT2 TKT NEK9 ATG10 NBR1 KPNA6 ATG101 HADHA LZTR1 CUL3 SQSTM1 TUFM CLN8 VDAC1 PCM1 EIF4G1 PSMA7 NUDT15 RAB7A NASP LRPPRC KRTAP10-9 P4HB TBC1D2B PFKP VPS35 KASH5 OSBPL3 HBG1 MLX IRGQ ST13 INSYN1 PDCD6IP FYCO1 RPN1 GABARAP KHSRP SIK2 CLINT1 NIPSNAP2 STBD1 TAX1BP1 FNIP1 PPP2R2B POLD1 CALCOCO2 ATG2A CBR1 HPRT1 DNAH7 NIPSNAP1 ULK2 RANGAP1 KRTAP10-7 YARS1 TSR2 IPO5 RASSF1 FANCC KIAA1958 NEDD4 ULK1 TBC1D25 PRKAR1A PSMA1 HAP1 EGFR BNIP3L ENO1 NUDT21 TRIM21 EPRS1 SF3B4 SSBP1 KRT6C WBP2 ALB TUBA1C RPS9 DHX9 TTBK2 ATG7 SNRPC PFN2 EIF4A1 DOK1 SNRPE SRSF1 ANKFY1 PEBP1 HACD3 H2AC4 ZNF638 EEF1G MARS1 ILF3 ZNF774 PFN1 U2AF2 PRDX2 XRCC6 EEF1A2 HNRNPU KRT9 RPL35A SNRPG RPL13A SRSF10 DDX1 GPR37 FTO GSTP1 CTSA DYNC1LI1 PPP2R1A NCBP1 ACAT1 KRT5 EEF1B2 RPL5 RFC1 KRT2 TUBA4A RPL21 KRT6B PHGDH KRT75 RPLP0 TMC1 CCT7 IGF2BP3 HSPA9 G3BP2 DHX15 TUBB UBE2O TARDBP YWHAE SMARCC2 TP53INP2 KRT77 KRT80 PPP1CC H2BC21 SNRNP70 C1QBP ATG4B PPP3CB CCT6A ELAVL1 ALDH3A2 RTRAF SMARCA4 GTPBP4 DYNC1H1 SRSF4 ATG16L1 PPIA MPP2 RBM34 TECPR2 RBM39 PABPC4 BLMH PDCD6 HNRNPAB FTSJ3 S100A9 PUF60 NAP1L1 TFG TOP1 RANBP2 TMEM160 PDXK TUBB1 MEFV KRT24 HNRNPC RPS7 PAICS SEC23B RPL24 PSMD1 EEF1A1 PHB2 GARS1 SRSF5 HSPH1 ALYREF YBX1 RPLP2 FAU

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Protein:

Eg: PBRM1 | ARID1A | BRCA1

Function:

Eg: Homologous recombination

Path:

Eg: SMC5 > DMC1 | PBRM1 > BRCA2

Relationship:

Full list of relationships

Graph tools:

Note this may take some time with > 30 proteins

Filter Graph:

PKG Score Threshold: 0.8

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Filter Table:

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Source	Target	Relationship Type	Directed	Sign	DB Score	PKG Score	Database	References
ALYREF	NCBP1	◼ PHYSICAL_INTERACTION			805.0	0.8	STRING	36370105
ANK2	GABARAP	◼ PHYSICAL_INTERACTION			929.0	0.92	STRING	36370105
ARFGAP1	MAP1LC3B	◼ PHYSICAL_INTERACTION			3.0	0.9	intact	21900206 2001699 8089645
ATG101	ULK1	◼ PHYSICAL_INTERACTION			861.0	0.86	STRING	36370105
ATG16L1	ULK1	◼ PHYSICAL_INTERACTION			835.0	0.83	STRING	36370105
ATG4B	MAP1LC3B	◼ CLEAVAGE	✅		2.0	0.8	intact	7261317 19322194
ATG4B	GABARAPL2	◼ CLEAVAGE	✅	+	0.83	0.83	Signor	16303767
ATG4B	GABARAP	◼ CLEAVAGE	✅	+	0.84	0.84	Signor	16303767
ATG4B	GABARAPL2	◼ PHYSICAL_INTERACTION			880.0	0.88	STRING	36370105
ATG4B	GABARAP	◼ PHYSICAL_INTERACTION			882.0	0.88	STRING	36370105

Showing 1 to 10 of 398 entries